https://osiris.eemb.ucsb.edu/wiki/galaxyucsb/index.php?action=history&feed=atom&title=Implement_Beast 2026-05-11T00:49:29Z Revision history for this page on the wiki MediaWiki 1.28.2 https://osiris.eemb.ucsb.edu/wiki/galaxyucsb/index.php?title=Implement_Beast&diff=502&oldid=prev 2011-11-22T02:07:29Z

<p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class='diff-marker' /> <col class='diff-content' /> <col class='diff-marker' /> <col class='diff-content' /> <tr style='vertical-align: top;' lang='en'> <td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td> <td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 02:07, 22 November 2011</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l1" >Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>&#160;</td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>BEAST: http://beast.bio.ed.ac.uk/Main_Page</div></td><td class='diff-marker'>&#160;</td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>BEAST: http://beast.bio.ed.ac.uk/Main_Page</div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr> <tr><td colspan="2">&#160;</td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">We need BEAST to execute xml files in Galaxy. We should be able to see the log file and trees file while the program is running. This is very similar to Trinity. Also, when the program is finished running, it would be useful to know where the trees and log files are on knot (their path). Furthermore, BEAST makes use of multiple CPUs and/or GPUs. It would be very useful to have the option of running BEAST on CPUs vs GPUs.</ins></div></td></tr> </table>

Marko https://osiris.eemb.ucsb.edu/wiki/galaxyucsb/index.php?title=Implement_Beast&diff=472&oldid=prev 2011-11-20T18:31:50Z

<p>Created page with &quot;BEAST: http://beast.bio.ed.ac.uk/Main_Page&quot;</p> <p><b>New page</b></p><div>BEAST: http://beast.bio.ed.ac.uk/Main_Page</div>

Marko