Skogsbergia lerneri - Revision history

128.111.227.98 at 01:44, 15 November 2011

2011-11-15T01:44:31Z

2011-11-15T01:44:07Z

2011-11-12T05:07:15Z

2011-11-12T05:06:49Z

2011-11-12T05:06:17Z

2011-11-12T05:00:37Z

2011-11-12T04:59:19Z

2011-11-12T04:58:45Z

2011-11-12T04:58:00Z

2011-11-12T04:56:11Z

← Older revision		Revision as of 01:44, 15 November 2011
Line 22:		Line 22:
	TtGAGTTCAAGTGTTACTcTAGCCACACTGgATACCCTGgcTCCcTTAtAGgTTGGTTCATtCTTtGtAATGACCTTCCA		TtGAGTTCAAGTGTTACTcTAGCCACACTGgATACCCTGgcTCCcTTAtAGgTTGGTTCATtCTTtGtAATGACCTTCCA
	TTtGTTGGTCTTACAGTCtGCTG		TTtGTTGGTCTTACAGTCtGCTG
−
−
−
−	~~[[File:Test.jpg]]~~

← Older revision		Revision as of 01:44, 15 November 2011
Line 22:		Line 22:
	TtGAGTTCAAGTGTTACTcTAGCCACACTGgATACCCTGgcTCCcTTAtAGgTTGGTTCATtCTTtGtAATGACCTTCCA		TtGAGTTCAAGTGTTACTcTAGCCACACTGgATACCCTGgcTCCcTTAtAGgTTGGTTCATtCTTtGtAATGACCTTCCA
	TTtGTTGGTCTTACAGTCtGCTG		TTtGTTGGTCTTACAGTCtGCTG
		+
		+
		+
		+	[[File:Test.jpg]]

@@ Line 13: / Line 13: @@
-<p>>contig02168  length=583  numreads=7  gene=isogroup01241  status=isotig
+<p>>contig02168  length=583  numreads=7  gene=isogroup01241  status=isotig</p>
 ATAAGATGAGGACACAGACACTGTTCCCcACACTCACACACATCAAGAaTACAGAACTCCAGGgTCTCTCGGAaGTTCAC
 TTCCAAGCAGGAGATTTtGGATAGAGCCATCTCACACTTGTGATGGGCTTTCTGTCTCTGTGCTTTTGTGCAGGTTGGAG
@@ Line 21: / Line 21: @@
 aGGCGCCTTTTTtAACAGGAAGTTTGACCAATTTTCCATCAACCTTCACATCTTTtCTGCTGATGACTATGGTCGCTCCT
 TtGAGTTCAAGTGTTACTcTAGCCACACTGgATACCCTGgcTCCcTTAtAGgTTGGTTCATtCTTtGtAATGACCTTCCA
-TTtGTTGGTCTTACAGTCtGCTG</p>
+TTtGTTGGTCTTACAGTCtGCTG

@@ Line 9: / Line 9: @@
 # A blast search, available in the Galaxy history, yields 2 contigs.
 ##contig02168 - when blasted against GenBank hits vitellogenin
-##contig00156 - when blasted against GenBank hits '''kielins''' and '''mucins'''<p>>contig02168  length=583  numreads=7  gene=isogroup01241  status=isotig
+##contig00156 - when blasted against GenBank hits '''kielins''' and '''mucins'''
 ATAAGATGAGGACACAGACACTGTTCCCcACACTCACACACATCAAGAaTACAGAACTCCAGGgTCTCTCGGAaGTTCAC
 TTCCAAGCAGGAGATTTtGGATAGAGCCATCTCACACTTGTGATGGGCTTTCTGTCTCTGTGCTTTTGTGCAGGTTGGAG

@@ Line 9: / Line 9: @@
 # A blast search, available in the Galaxy history, yields 2 contigs.
 ##contig02168 - when blasted against GenBank hits vitellogenin
-##contig00156 - when blasted against GenBank hits '''kielins''' and '''mucins'''
+##contig00156 - when blasted against GenBank hits '''kielins''' and '''mucins'''<p>>contig02168  length=583  numreads=7  gene=isogroup01241  status=isotig

← Older revision		Revision as of 04:58, 12 November 2011
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	# 454 Sequencing of specimens from Florida Keys was completed. The sequencing was done from Median Eyes and Compound Eyes only.<p>(We expect homologs to be expressed at the upper lip, the site of luciferase excretion; so eyes may not be the best tissue for finding luciferase homologs.)</p>		# 454 Sequencing of specimens from Florida Keys was completed. The sequencing was done from Median Eyes and Compound Eyes only.<p>(We expect homologs to be expressed at the upper lip, the site of luciferase excretion; so eyes may not be the best tissue for finding luciferase homologs.)</p>
	# The 454 transcriptome is assembled in Galaxy, with a shared history called Skogsbergia Eyes [http://knot.cnsi.ucsb.edu:8080/u/ostratodd/h/skogsbergia-eyes]		# The 454 transcriptome is assembled in Galaxy, with a shared history called Skogsbergia Eyes [http://knot.cnsi.ucsb.edu:8080/u/ostratodd/h/skogsbergia-eyes]
		+	# A blast search, available in the Galaxy history, yields 2 contigs.
		+	##

@@ Line 5: / Line 5: @@
 Steps completed thus far:
-# 454 Sequencing of specimens from Florida Keys was completed.  The sequencing was done from Median Eyes and Compound Eyes only.
+# 454 Sequencing of specimens from Florida Keys was completed.  The sequencing was done from Median Eyes and Compound Eyes only.<p>(We expect homologs to be expressed at the upper lip, the site of luciferase excretion; so eyes may not be the best tissue for finding luciferase homologs.)</p>
 # The 454 transcriptome is assembled in Galaxy, with a shared history called Skogsbergia Eyes [http://knot.cnsi.ucsb.edu:8080/u/ostratodd/h/skogsbergia-eyes]