Difference between revisions of "Sarsielloid Molecular & Morphological"
From Ucsbgalaxy
(→Published Transcriptomes) |
|||
(7 intermediate revisions by 2 users not shown) | |||
Line 1: | Line 1: | ||
==Links to Galaxy Assemblies== | ==Links to Galaxy Assemblies== | ||
− | *[http://galaxy2.cnsi.ucsb.edu/u/celia/h/asteropterygionoculitristis Asteropterygion oculitristis] | + | *Outgroups |
− | *[http://galaxy2.cnsi.ucsb.edu/u/celia/h/ | + | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/asteropterygionoculitristis Asteropterygion oculitristis] |
− | *[http://galaxy2.cnsi.ucsb.edu/u/celia/h/ | + | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/asteropellamortenseni Asteropella mortenseni] |
− | *[http://galaxy2.cnsi.ucsb.edu/u/celia/h/harbansuspaucichelatus Harbansus paucichelatus] | + | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/actinosetachelisparsa Actinoseta chelisparsa] |
− | *[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eusarsiellaozotothrix Eusarsiella ozotothrix] | + | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/pteryocypridinalongwhiteeye Pterocypridina? "longwhiteeye"] |
− | *[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eusarsiellatexana Eusarsiella texana] | + | *Ingroups |
− | *[http://galaxy2.cnsi.ucsb.edu/u/celia/h/ | + | *Rutiderma |
− | *[http://galaxy2.cnsi.ucsb.edu/u/celia/h/ | + | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/rutidermafl Rutiderma "Florida"] |
− | *[http://galaxy2.cnsi.ucsb.edu/u/celia/h/ | + | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/rutidermadux Rutiderma dux] |
− | *[http://galaxy2.cnsi.ucsb.edu/u/celia/h/ | + | *Euphilomedes |
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/unnamed-history Euphilomedes crystalliviridis] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/euphilomedes-jiigurru Euphilomedes jiigurru] | ||
+ | *Harbansus | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/harbansusslatteryi Harbansus slatteryi] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/harbansuspaucichelatus Harbansus paucichelatus] | ||
+ | *Eusarsiella | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eusarsiellanodimarginis Eusarsiella nodimarginis] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eusarsiellabryanjuarezi Eusarsiella bryanjuarezi] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eusarsiellacornuta Eusarsiella cornuta] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eusarsiellaozotothrix Eusarsiella ozotothrix] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eusarsiellatexana Eusarsiella texana] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eusarsiellauncus Eusarsiella uncus] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eusarsiella-zostericola Eusarsiella zostericola] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eusarsiellagigacantha Eusarsiella gigacantha] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eusarsiellaeli Eusarsiella eli] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eusarsiella-culteri Eusarsiella culteri] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eusarsiella-asciformis Eusarsiella asciformis] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eusarsiellapaniculata Eusarsiella paniculata] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eusarsiellamicroasciformis-1 Eusarsiella "microasciformis"] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eusarsiellaspringthorpei Eusarsiella springthorpei] | ||
+ | *Others | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/alternochelata-lizardensis Alternochelata lizardensis] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/chelicopia-lorica Chelicopia lorica] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/eurypylus-pulcher Eurypylus pulcher] | ||
+ | **[http://galaxy2.cnsi.ucsb.edu/u/celia/h/sarsiellareticulata Sarsiella reticulata] | ||
==Published Transcriptomes== | ==Published Transcriptomes== | ||
*[http://datadryad.org/resource/doi:10.5061/dryad.277g0 Euphilomedes carcharodonta (juvenile male eyes)] | *[http://datadryad.org/resource/doi:10.5061/dryad.277g0 Euphilomedes carcharodonta (juvenile male eyes)] | ||
Line 23: | Line 48: | ||
* [http://osiris.eemb.ucsb.edu/IlluminaData/celia/Sarsielloid_morpho/drafttree1.tre Tree (3/20/15)] | * [http://osiris.eemb.ucsb.edu/IlluminaData/celia/Sarsielloid_morpho/drafttree1.tre Tree (3/20/15)] | ||
* [http://osiris.eemb.ucsb.edu/IlluminaData/celia/Sarsielloid_morpho/Titrated%20matrices/ Titrated Matrices (Folder)] | * [http://osiris.eemb.ucsb.edu/IlluminaData/celia/Sarsielloid_morpho/Titrated%20matrices/ Titrated Matrices (Folder)] | ||
+ | |||
+ | ==Collection Notes== | ||
+ | *[http://osiris.eemb.ucsb.edu/IlluminaData/celia/FKMNS%20collecting.xlsx Florida Keys collecting data (Excel Workbook)] | ||
+ | *[http://osiris.eemb.ucsb.edu/IlluminaData/celia/LIRS_collecting.xlsx Lizard Island collecting data (Excel Workbook)] |
Latest revision as of 14:44, 15 December 2015
Contents
Links to Galaxy Assemblies[edit]
- Outgroups
- Ingroups
- Rutiderma
- Euphilomedes
- Harbansus
- Eusarsiella
- Eusarsiella nodimarginis
- Eusarsiella bryanjuarezi
- Eusarsiella cornuta
- Eusarsiella ozotothrix
- Eusarsiella texana
- Eusarsiella uncus
- Eusarsiella zostericola
- Eusarsiella gigacantha
- Eusarsiella eli
- Eusarsiella culteri
- Eusarsiella asciformis
- Eusarsiella paniculata
- Eusarsiella "microasciformis"
- Eusarsiella springthorpei
- Others
Published Transcriptomes[edit]
- Euphilomedes carcharodonta (juvenile male eyes)
- Euphilomedes morini (compound and median eyes sequenced separately 454 data)
Morphological Data[edit]
- Rutidermatidae (Excel Workbook)
- Philomedidae (Excel Workbook)
- Sarsiellidae
- Character list (Word Document)
- Bibliography (PDFs)
- Matrix (txt)
- Tree (3/20/15)
- Titrated Matrices (Folder)