Difference between revisions of "Galaxy Development Priorities"
From Ucsbgalaxy
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| + | ==Roger's Current Tasks== | ||
| + | *[[Evolmap output]] | ||
| + | *[[Implement EvolMap -- Assigned to Roger]] | ||
| + | |||
| + | ==Karl's Current Tasks== | ||
| + | *[[Add proxy on macroevolution]] | ||
| + | *[[monit]] | ||
| + | *[[chron]] | ||
| + | |||
==To Add== | ==To Add== | ||
| − | *[[ | + | *[[Multiple instances]] |
| − | |||
*[[Implement Hammstr - an external pipeline of tools]] | *[[Implement Hammstr - an external pipeline of tools]] | ||
| + | *[[Implement TransAbyss pipeline]] | ||
*[[Implement Davis' Illumina Scripts]] | *[[Implement Davis' Illumina Scripts]] | ||
| − | |||
| − | |||
*[[Implement r8s]] | *[[Implement r8s]] | ||
*[[Implement sequence alignment tools, MUSCLE MAFFT PROALIGN]] | *[[Implement sequence alignment tools, MUSCLE MAFFT PROALIGN]] | ||
*[[Implement phylogenetics scripts like format converters and concatenation tools]] | *[[Implement phylogenetics scripts like format converters and concatenation tools]] | ||
| − | |||
*[[Implement NCBI's tools from SRA Toolkit]] | *[[Implement NCBI's tools from SRA Toolkit]] | ||
| + | *[[Add uniprot and perhaps other databases to blast]] | ||
| + | |||
==Added== | ==Added== | ||
| + | *[[Recently enabled tools]] | ||
| + | *[[Regular Expression Search and replace -- Assigned to Karl]] | ||
| + | *[[Beast]] | ||
| + | *[[Implement RAxML]] | ||
Latest revision as of 01:37, 7 December 2011
Roger's Current Tasks[edit]
Karl's Current Tasks[edit]
To Add[edit]
- Multiple instances
- Implement Hammstr - an external pipeline of tools
- Implement TransAbyss pipeline
- Implement Davis' Illumina Scripts
- Implement r8s
- Implement sequence alignment tools, MUSCLE MAFFT PROALIGN
- Implement phylogenetics scripts like format converters and concatenation tools
- Implement NCBI's tools from SRA Toolkit
- Add uniprot and perhaps other databases to blast
