Difference between revisions of "Galaxy Development Priorities"
From Ucsbgalaxy
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*[[Implement TransAbyss pipeline]] | *[[Implement TransAbyss pipeline]] | ||
*[[Implement Davis' Illumina Scripts]] | *[[Implement Davis' Illumina Scripts]] | ||
| − | |||
*[[Implement r8s]] | *[[Implement r8s]] | ||
*[[Implement sequence alignment tools, MUSCLE MAFFT PROALIGN]] | *[[Implement sequence alignment tools, MUSCLE MAFFT PROALIGN]] | ||
*[[Implement phylogenetics scripts like format converters and concatenation tools]] | *[[Implement phylogenetics scripts like format converters and concatenation tools]] | ||
*[[Implement NCBI's tools from SRA Toolkit]] | *[[Implement NCBI's tools from SRA Toolkit]] | ||
| + | *[[Add uniprot and perhaps other databases to blast]] | ||
==Added== | ==Added== | ||
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*[[Regular Expression Search and replace -- Assigned to Karl]] | *[[Regular Expression Search and replace -- Assigned to Karl]] | ||
*[[Beast]] | *[[Beast]] | ||
| + | *[[Implement RAxML]] | ||
Latest revision as of 02:37, 7 December 2011
Roger's Current Tasks[edit]
Karl's Current Tasks[edit]
To Add[edit]
- Multiple instances
- Implement Hammstr - an external pipeline of tools
- Implement TransAbyss pipeline
- Implement Davis' Illumina Scripts
- Implement r8s
- Implement sequence alignment tools, MUSCLE MAFFT PROALIGN
- Implement phylogenetics scripts like format converters and concatenation tools
- Implement NCBI's tools from SRA Toolkit
- Add uniprot and perhaps other databases to blast
