Difference between revisions of "Cypridinidae Phylogeny"
From Ucsbgalaxy
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===Transcriptome Data=== | ===Transcriptome Data=== | ||
| − | * Oakley et al (2013) included Skogsbergia lerneri and Vargula tsujii | + | * Oakley et al (2013) included Skogsbergia lerneri and Vargula tsujii [[http://mbe.oxfordjournals.org/content/30/1/215/F1.expansion.html]] |
** OET13 included Regier (2010) data in S. lerneri | ** OET13 included Regier (2010) data in S. lerneri | ||
* von Reumont (2011) included 1 undescribed species. Based on collection locality in Mediterranean, this is likely Skogsbergia [[http://mbe.oxfordjournals.org/content/early/2011/12/20/molbev.msr270.full]] | * von Reumont (2011) included 1 undescribed species. Based on collection locality in Mediterranean, this is likely Skogsbergia [[http://mbe.oxfordjournals.org/content/early/2011/12/20/molbev.msr270.full]] | ||
Revision as of 10:27, 25 September 2013
Data Sources
Morphological matrix
- Cohen and Morin (2003)
- Uploaded to MorphoBank
- Requires conversion of species names to match other data
- Partly done, but needed for some data partitions
- TO DO: Create separate partitions for binary and multi
Lisa Torres Matrix
- Thesis of Vanessa Gonzalez
- 16S, COI, 12S and H3 genes
