Difference between revisions of "Restarting Galaxy"
From Ucsbgalaxy
| Line 1: | Line 1: | ||
# [[Connect to knot using the galaxy user login]] | # [[Connect to knot using the galaxy user login]] | ||
# Find the galaxy processs that are running by typing: | # Find the galaxy processs that are running by typing: | ||
| − | ps aux | grep galaxy | + | ps aux | grep galaxy |
# Identify the process numbers for 3 Galaxy processes, which will change every time Galaxy is restarted. | # Identify the process numbers for 3 Galaxy processes, which will change every time Galaxy is restarted. | ||
For example this line: | For example this line: | ||
| − | galaxy 11638 0.0 0.0 63856 988 ? S Nov10 0:00 /bin/sh ./run.sh --reload | + | galaxy 11638 0.0 0.0 63856 988 ? S Nov10 0:00 /bin/sh ./run.sh --reload |
indicates the process has a number of 11638. | indicates the process has a number of 11638. | ||
Revision as of 11:53, 21 November 2011
- Connect to knot using the galaxy user login
- Find the galaxy processs that are running by typing:
ps aux | grep galaxy
- Identify the process numbers for 3 Galaxy processes, which will change every time Galaxy is restarted.
For example this line:
galaxy 11638 0.0 0.0 63856 988 ? S Nov10 0:00 /bin/sh ./run.sh --reload
indicates the process has a number of 11638.
The 3 processes look like:
- /bin/sh ./run.sh --reload
- python ./scripts/paster.py serve universe_wsgi.ini --reload
- /home/galaxy/bin/python ./scripts/paster.py serve universe_wsgi.ini --reload
Next, kill the three processes with this command:
kill -9 <ID1> <ID2> <ID3>
Then change to the galaxy-dist directory:
cd /home/galaxy/galaxy-dist
Then restart Galaxy by executing the run.sh script:
nohup ./run.sh --reload &
Alternate method to restart Galaxy:
./run.sh --daemon --reload
