Opsins from full genomes

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1. Downloaded Metazoa genomes from ensembl [1] on Jan 31, 2013. There were 51 genomes. I downloaded the predicted cDNA from each genome using recursive wget on the ftp site, and the option --accept *.cdna.* These are saved on osiris in oakley user under the directory OpsinGenomes

list of metazoa genomes for opsinomics


2. unzipped all sequences

3. combined into one database for blast