Difference between revisions of "UCSB Galaxy Documentation"
From Ucsbgalaxy
| Line 12: | Line 12: | ||
**[[Implement Beast]] | **[[Implement Beast]] | ||
**[[Implement r8s]] | **[[Implement r8s]] | ||
| − | **[[Implement sequence alignment tools, MUSCLE MAFFT PROALIGN] | + | **[[Implement sequence alignment tools, MUSCLE MAFFT PROALIGN]] |
**[[Implement phylogenetics scripts like format converters]] | **[[Implement phylogenetics scripts like format converters]] | ||
**[[Implement TransAbyss pipeline]] | **[[Implement TransAbyss pipeline]] | ||
Revision as of 18:53, 10 November 2011
Galaxy Topics
- The very basics
- Uploading data
- Using Trinity Assembler
- Adding a tool from tool shed
- Galaxy Development Priorities
- Regular Expression Search and replace
- Implement EvolMap
- Implement Hammstr - an external pipeline of tools
- Implement Davis' Illumina Scripts
- Implement Beast
- Implement r8s
- Implement sequence alignment tools, MUSCLE MAFFT PROALIGN
- Implement phylogenetics scripts like format converters
- Implement TransAbyss pipeline
- Galaxy Problems to address
