Difference between revisions of "UCSB Galaxy Documentation"
From Ucsbgalaxy
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* [[Galaxy Problems to address]] | * [[Galaxy Problems to address]] | ||
** [['Memory leak' type behavior]] | ** [['Memory leak' type behavior]] | ||
| + | ** [[Install cron jobs to clear deleted datasets]] | ||
** [[Barcode splitter output]] | ** [[Barcode splitter output]] | ||
** [[blast2go not working]] | ** [[blast2go not working]] | ||
Revision as of 22:40, 10 November 2011
Galaxy Topics
- The very basics
- Uploading data
- Using Trinity Assembler
- Adding a tool from tool shed
- Galaxy Development Priorities
- Regular Expression Search and replace
- Implement EvolMap
- Implement Hammstr - an external pipeline of tools
- Implement Davis' Illumina Scripts
- Implement RAxML
- Implement Beast
- Implement r8s
- Implement sequence alignment tools, MUSCLE MAFFT PROALIGN
- Implement phylogenetics scripts like format converters and concatenation tools
- Implement TransAbyss pipeline
- Galaxy Problems to address
