Difference between revisions of "UCSB Galaxy Documentation"
From Ucsbgalaxy
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*[[Galaxy Development Priorities]] | *[[Galaxy Development Priorities]] | ||
| − | **[[Regular Expression Search and replace | + | **[[Regular Expression Search and replace -- Assigned to Karl]] |
| − | **[[ | + | **[[Implement EvolMap -- Assigned to Roger]] |
**[[Implement Hammstr - an external pipeline of tools]] | **[[Implement Hammstr - an external pipeline of tools]] | ||
**[[Implement Davis' Illumina Scripts]] | **[[Implement Davis' Illumina Scripts]] | ||
Revision as of 09:56, 11 November 2011
Galaxy Topics
- The very basics
- Uploading data
- Using Trinity Assembler
- Adding a tool from tool shed
- Galaxy Development Priorities
- Regular Expression Search and replace -- Assigned to Karl
- Implement EvolMap -- Assigned to Roger
- Implement Hammstr - an external pipeline of tools
- Implement Davis' Illumina Scripts
- Implement RAxML
- Implement Beast
- Implement r8s
- Implement sequence alignment tools, MUSCLE MAFFT PROALIGN
- Implement phylogenetics scripts like format converters and concatenation tools
- Implement TransAbyss pipeline
- Galaxy Problems to address
